DisGeNET - a database of gene-disease associations

List of associated variants

Hepatitis C, Chronic, C0524910

Source: ALL

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Gene

Disease

Variant

Source

DSI _v

DPI _v

pLI

Consequence

AF_EXOME

AF_GENOME

Variant	Gene	DSI _v	DPI _v	Chr	Position	Consequence	Alleles	Class	AF EXOME	AF GENOME	Num. diseases
rs25487	XRCC1	0.441	0.800	19	43551574	missense variant	T/C	snv	0.68	0.71	205
rs58542926	TM6SF2	0.630	0.440	19	19268740	missense variant	C/T	snv	6.5E-02	5.8E-02	42
rs3775291	TLR3	0.602	0.640	4	186082920	missense variant	C/G;T	snv	1.2E-04; 0.28		51
rs5743708	TLR2	0.525	0.800	4	153705165	missense variant	G/A	snv	1.7E-02	1.8E-02	98
rs5743704	TLR2	0.763	0.240	4	153704799	missense variant	C/A	snv	2.8E-02	2.8E-02	9
rs17047200	TLL1	0.827	0.200	4	166008836	intron variant	A/T	snv		0.18	5
rs4969168	SOCS3	0.790	0.480	17	78357712	3 prime UTR variant	A/G	snv		0.71	7
rs11854484	SLC28A2 ; LOC101928414	0.925	0.120	15	45253280	missense variant	C/T	snv	0.47	0.45	2
rs12989760	SH3YL1	0.925	0.120	2	250470	intron variant	T/C	snv			2
rs16851720	RNF7	0.827	0.120	3	141744456	intron variant	A/C	snv		0.21	5
rs758564400	REN	0.925	0.120	1	204156683	missense variant	A/G	snv	4.0E-06		5
rs10814325	RECK	0.827	0.200	9	36036597	upstream gene variant	T/A;C;G	snv			7
rs738409	PNPLA3	0.557	0.720	22	43928847	missense variant	C/G	snv	0.28	0.22	88
rs2779180	PLIN3	1.000	0.080	19	4841139	intron variant	A/G	snv		0.37	1
rs1470452230	PAEP	0.925	0.120	9	135561895	missense variant	A/C	snv		7.0E-06	2
rs1052133	OGG1 ; CAMK1	0.476	0.800	3	9757089	missense variant	C/G	snv	0.27	0.22	147
rs1293762	OAS2	1.000	0.080	12	112993031	intron variant	T/G	snv		0.67	1
rs2071286	NOTCH4	0.752	0.280	6	32212119	intron variant	C/T	snv		0.17	12
rs12785878	NADSYN1	0.677	0.520	11	71456403	intron variant	G/A;T	snv			25
rs7944926	NADSYN1	0.807	0.200	11	71454579	intron variant	A/G	snv		0.54	7
rs1217691063	MTHFR	0.330	0.920	1	11796309	missense variant	A/G	snv	4.0E-06	7.0E-06	614
rs2596542	MICA-AS1 ; MICA	0.724	0.200	6	31398818	upstream gene variant	C/T	snv		0.41	18
rs4374383	MERTK	0.776	0.200	2	112013193	intron variant	A/G	snv		0.58	10
rs641738	LOC112268246 ; TMC4 ; MBOAT7	0.689	0.320	19	54173068	missense variant	T/A;C;G	snv			22
rs1800562	LOC108783645 ; HFE	0.435	0.880	6	26092913	missense variant	G/A	snv	3.3E-02	3.8E-02	262